2022-12-03T00:13:41 cwltool 3.1.20220224085855 -> 3.1.20221109155812 https://github.com/common-workflow-language/cwltool/releases
2022-12-03T00:13:44 attrpath: cwltool
2022-12-03T00:13:44 Checking auto update branch...
2022-12-03T00:13:47 [version] 
2022-12-03T00:13:47 [version] skipping because derivation has updateScript
2022-12-03T00:13:47 [rustCrateVersion] 
2022-12-03T00:13:47 [rustCrateVersion] No cargoSha256 found
2022-12-03T00:13:47 [golangModuleVersion] 
2022-12-03T00:13:47 [golangModuleVersion] Not a buildGoModule package with vendorSha256
2022-12-03T00:13:47 [updateScript] 
2022-12-03T00:13:50 [updateScript] Success
2022-12-03T00:13:50 [updateScript] 
Going to be running update for following packages:
 - cwltool-3.1.20220224085855

Press Enter key to continue...
Running update for:
 - cwltool-3.1.20220224085855: UPDATING ...
 - cwltool-3.1.20220224085855: DONE.

Packages updated!

2022-12-03T00:13:50 
2022-12-03T00:13:50 [quotedUrls]
2022-12-03T00:13:50 [quotedUrls] nothing found to replace
2022-12-03T00:13:50 Diff after rewrites:
diff --git a/pkgs/applications/science/misc/cwltool/default.nix b/pkgs/applications/science/misc/cwltool/default.nix
index 6a1bdc3de16..4732481261f 100644
--- a/pkgs/applications/science/misc/cwltool/default.nix
+++ b/pkgs/applications/science/misc/cwltool/default.nix
@@ -7,14 +7,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "cwltool";
-  version = "3.1.20220224085855";
+  version = "3.1.20221201130942";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "common-workflow-language";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-7+1xOV5Lodqtku0wX1urAEHsCcYKM3Vcd5RDg4DdVow=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-PeddmHMJYtj/AAItmUVeyETizF7SKzkJ3bXYkeZU+xs=";
   };
 
   postPatch = ''

2022-12-03T00:15:18 An auto update branch exists with message `cwltool: 3.1.20220224085855 -> 3.1.20220406080846`. New version is 3.1.20221201130942.
2022-12-03T00:15:18 The auto update branch does not match or exceed the new version.
2022-12-03T00:15:23 Received ExitFailure 100 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix-build --option sandbox true --arg config "{ allowBroken = true; allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A cwltool
Received ExitFailure 1 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix log -f . cwltool
Standard output:

warning: unknown setting 'experimental-features'
error: Package ‘python3.10-schema-salad-8.3.20220913105718’ in /var/cache/nixpkgs-update/worker/worktree/cwltool/pkgs/development/python-modules/schema-salad/default.nix:65 is marked as broken, refusing to evaluate.

a) To temporarily allow broken packages, you can use an environment variable
   for a single invocation of the nix tools.

     $ export NIXPKGS_ALLOW_BROKEN=1
     
 Note: For `nix shell`, `nix build`, `nix develop` or any other Nix 2.4+
 (Flake) command, `--impure` must be passed in order to read this
 environment variable.
    
b) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

c) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

(use '--show-trace' to show detailed location information)

2022-12-03T01:21:45 cwltool 3.1.20220224085855 -> 3.1.20221109155812 https://pypi.org/project/cwltool/
2022-12-03T01:21:47 attrpath: cwltool
2022-12-03T01:21:47 Checking auto update branch...
2022-12-03T01:21:50 [version] 
2022-12-03T01:21:50 [version] skipping because derivation has updateScript
2022-12-03T01:21:50 [rustCrateVersion] 
2022-12-03T01:21:50 [rustCrateVersion] No cargoSha256 found
2022-12-03T01:21:50 [golangModuleVersion] 
2022-12-03T01:21:50 [golangModuleVersion] Not a buildGoModule package with vendorSha256
2022-12-03T01:21:50 [updateScript] 
2022-12-03T01:21:53 [updateScript] Success
2022-12-03T01:21:53 [updateScript] this derivation will be built:
  /nix/store/c0da9sra50282y0gk8wqr4liradnnw0r-packages.json.drv
building '/nix/store/c0da9sra50282y0gk8wqr4liradnnw0r-packages.json.drv'...

Going to be running update for following packages:
 - cwltool-3.1.20220224085855

Press Enter key to continue...
Running update for:
 - cwltool-3.1.20220224085855: UPDATING ...
 - cwltool-3.1.20220224085855: DONE.

Packages updated!

2022-12-03T01:21:53 
2022-12-03T01:21:53 [quotedUrls]
2022-12-03T01:21:53 [quotedUrls] nothing found to replace
2022-12-03T01:21:53 Diff after rewrites:
diff --git a/pkgs/applications/science/misc/cwltool/default.nix b/pkgs/applications/science/misc/cwltool/default.nix
index 6a1bdc3de16..4732481261f 100644
--- a/pkgs/applications/science/misc/cwltool/default.nix
+++ b/pkgs/applications/science/misc/cwltool/default.nix
@@ -7,14 +7,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "cwltool";
-  version = "3.1.20220224085855";
+  version = "3.1.20221201130942";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "common-workflow-language";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-7+1xOV5Lodqtku0wX1urAEHsCcYKM3Vcd5RDg4DdVow=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-PeddmHMJYtj/AAItmUVeyETizF7SKzkJ3bXYkeZU+xs=";
   };
 
   postPatch = ''

2022-12-03T01:23:23 An auto update branch exists with message `cwltool: 3.1.20220224085855 -> 3.1.20220406080846`. New version is 3.1.20221201130942.
2022-12-03T01:23:23 The auto update branch does not match or exceed the new version.
2022-12-03T01:23:27 Received ExitFailure 100 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix-build --option sandbox true --arg config "{ allowBroken = true; allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A cwltool
Received ExitFailure 1 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix log -f . cwltool
Standard output:

warning: unknown setting 'experimental-features'
error: Package ‘python3.10-schema-salad-8.3.20220913105718’ in /var/cache/nixpkgs-update/worker/worktree/cwltool/pkgs/development/python-modules/schema-salad/default.nix:65 is marked as broken, refusing to evaluate.

a) To temporarily allow broken packages, you can use an environment variable
   for a single invocation of the nix tools.

     $ export NIXPKGS_ALLOW_BROKEN=1
     
 Note: For `nix shell`, `nix build`, `nix develop` or any other Nix 2.4+
 (Flake) command, `--impure` must be passed in order to read this
 environment variable.
    
b) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

c) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

(use '--show-trace' to show detailed location information)

2022-12-03T12:53:50 cwltool 3.1.20220224085855 -> 3.1.20221109155812 https://repology.org/metapackage/cwltool/versions
2022-12-03T12:53:52 attrpath: cwltool
2022-12-03T12:53:52 Checking auto update branch...
2022-12-03T12:53:56 [version] 
2022-12-03T12:53:56 [version] skipping because derivation has updateScript
2022-12-03T12:53:56 [rustCrateVersion] 
2022-12-03T12:53:56 [rustCrateVersion] No cargoSha256 found
2022-12-03T12:53:56 [golangModuleVersion] 
2022-12-03T12:53:56 [golangModuleVersion] Not a buildGoModule package with vendorSha256
2022-12-03T12:53:56 [updateScript] 
2022-12-03T12:53:59 [updateScript] Success
2022-12-03T12:53:59 [updateScript] this derivation will be built:
  /nix/store/c0da9sra50282y0gk8wqr4liradnnw0r-packages.json.drv
building '/nix/store/c0da9sra50282y0gk8wqr4liradnnw0r-packages.json.drv'...

Going to be running update for following packages:
 - cwltool-3.1.20220224085855

Press Enter key to continue...
Running update for:
 - cwltool-3.1.20220224085855: UPDATING ...
 - cwltool-3.1.20220224085855: DONE.

Packages updated!

2022-12-03T12:53:59 
2022-12-03T12:53:59 [quotedUrls]
2022-12-03T12:53:59 [quotedUrls] nothing found to replace
2022-12-03T12:53:59 Diff after rewrites:
diff --git a/pkgs/applications/science/misc/cwltool/default.nix b/pkgs/applications/science/misc/cwltool/default.nix
index 6a1bdc3de16..4732481261f 100644
--- a/pkgs/applications/science/misc/cwltool/default.nix
+++ b/pkgs/applications/science/misc/cwltool/default.nix
@@ -7,14 +7,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "cwltool";
-  version = "3.1.20220224085855";
+  version = "3.1.20221201130942";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "common-workflow-language";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-7+1xOV5Lodqtku0wX1urAEHsCcYKM3Vcd5RDg4DdVow=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-PeddmHMJYtj/AAItmUVeyETizF7SKzkJ3bXYkeZU+xs=";
   };
 
   postPatch = ''

2022-12-03T12:55:27 An auto update branch exists with message `cwltool: 3.1.20220224085855 -> 3.1.20220406080846`. New version is 3.1.20221201130942.
2022-12-03T12:55:27 The auto update branch does not match or exceed the new version.
2022-12-03T12:55:32 Received ExitFailure 100 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix-build --option sandbox true --arg config "{ allowBroken = true; allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A cwltool
Received ExitFailure 1 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix log -f . cwltool
Standard output:

warning: unknown setting 'experimental-features'
error: Package ‘python3.10-schema-salad-8.3.20220913105718’ in /var/cache/nixpkgs-update/worker/worktree/cwltool/pkgs/development/python-modules/schema-salad/default.nix:65 is marked as broken, refusing to evaluate.

a) To temporarily allow broken packages, you can use an environment variable
   for a single invocation of the nix tools.

     $ export NIXPKGS_ALLOW_BROKEN=1
     
 Note: For `nix shell`, `nix build`, `nix develop` or any other Nix 2.4+
 (Flake) command, `--impure` must be passed in order to read this
 environment variable.
    
b) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

c) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

(use '--show-trace' to show detailed location information)

2022-12-03T17:43:51 cwltool 3.1.20220224085855 -> 3.1.20221201130942 https://pypi.org/project/cwltool/
2022-12-03T17:43:53 attrpath: cwltool
2022-12-03T17:43:53 Checking auto update branch...
2022-12-03T17:43:57 [version] 
2022-12-03T17:43:57 [version] skipping because derivation has updateScript
2022-12-03T17:43:57 [rustCrateVersion] 
2022-12-03T17:43:57 [rustCrateVersion] No cargoSha256 found
2022-12-03T17:43:57 [golangModuleVersion] 
2022-12-03T17:43:57 [golangModuleVersion] Not a buildGoModule package with vendorSha256
2022-12-03T17:43:57 [updateScript] 
2022-12-03T17:43:59 [updateScript] Success
2022-12-03T17:43:59 [updateScript] 
Going to be running update for following packages:
 - cwltool-3.1.20220224085855

Press Enter key to continue...
Running update for:
 - cwltool-3.1.20220224085855: UPDATING ...
 - cwltool-3.1.20220224085855: DONE.

Packages updated!

2022-12-03T17:43:59 
2022-12-03T17:43:59 [quotedUrls]
2022-12-03T17:44:00 [quotedUrls] nothing found to replace
2022-12-03T17:44:00 Diff after rewrites:
diff --git a/pkgs/applications/science/misc/cwltool/default.nix b/pkgs/applications/science/misc/cwltool/default.nix
index 6a1bdc3de16..4732481261f 100644
--- a/pkgs/applications/science/misc/cwltool/default.nix
+++ b/pkgs/applications/science/misc/cwltool/default.nix
@@ -7,14 +7,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "cwltool";
-  version = "3.1.20220224085855";
+  version = "3.1.20221201130942";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "common-workflow-language";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-7+1xOV5Lodqtku0wX1urAEHsCcYKM3Vcd5RDg4DdVow=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-PeddmHMJYtj/AAItmUVeyETizF7SKzkJ3bXYkeZU+xs=";
   };
 
   postPatch = ''

2022-12-03T17:45:27 An auto update branch exists with message `cwltool: 3.1.20220224085855 -> 3.1.20220406080846`. New version is 3.1.20221201130942.
2022-12-03T17:45:27 The auto update branch does not match or exceed the new version.
2022-12-03T17:45:31 Received ExitFailure 100 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix-build --option sandbox true --arg config "{ allowBroken = true; allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A cwltool
Received ExitFailure 1 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix log -f . cwltool
Standard output:

warning: unknown setting 'experimental-features'
error: Package ‘python3.10-schema-salad-8.3.20220913105718’ in /var/cache/nixpkgs-update/worker/worktree/cwltool/pkgs/development/python-modules/schema-salad/default.nix:65 is marked as broken, refusing to evaluate.

a) To temporarily allow broken packages, you can use an environment variable
   for a single invocation of the nix tools.

     $ export NIXPKGS_ALLOW_BROKEN=1
     
 Note: For `nix shell`, `nix build`, `nix develop` or any other Nix 2.4+
 (Flake) command, `--impure` must be passed in order to read this
 environment variable.
    
b) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

c) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

(use '--show-trace' to show detailed location information)

2022-12-03T23:11:24 cwltool 3.1.20220224085855 -> 3.1.20221201130942 https://github.com/common-workflow-language/cwltool/releases
2022-12-03T23:11:27 attrpath: cwltool
2022-12-03T23:11:27 Checking auto update branch...
2022-12-03T23:11:30 [version] 
2022-12-03T23:11:30 [version] skipping because derivation has updateScript
2022-12-03T23:11:30 [rustCrateVersion] 
2022-12-03T23:11:30 [rustCrateVersion] No cargoSha256 found
2022-12-03T23:11:30 [golangModuleVersion] 
2022-12-03T23:11:30 [golangModuleVersion] Not a buildGoModule package with vendorSha256
2022-12-03T23:11:30 [updateScript] 
2022-12-03T23:11:33 [updateScript] Success
2022-12-03T23:11:33 [updateScript] 
Going to be running update for following packages:
 - cwltool-3.1.20220224085855

Press Enter key to continue...
Running update for:
 - cwltool-3.1.20220224085855: UPDATING ...
 - cwltool-3.1.20220224085855: DONE.

Packages updated!

2022-12-03T23:11:33 
2022-12-03T23:11:33 [quotedUrls]
2022-12-03T23:11:33 [quotedUrls] nothing found to replace
2022-12-03T23:11:33 Diff after rewrites:
diff --git a/pkgs/applications/science/misc/cwltool/default.nix b/pkgs/applications/science/misc/cwltool/default.nix
index 6a1bdc3de16..4732481261f 100644
--- a/pkgs/applications/science/misc/cwltool/default.nix
+++ b/pkgs/applications/science/misc/cwltool/default.nix
@@ -7,14 +7,14 @@
 
 python3.pkgs.buildPythonApplication rec {
   pname = "cwltool";
-  version = "3.1.20220224085855";
+  version = "3.1.20221201130942";
   format = "setuptools";
 
   src = fetchFromGitHub {
     owner = "common-workflow-language";
     repo = pname;
-    rev = version;
-    sha256 = "sha256-7+1xOV5Lodqtku0wX1urAEHsCcYKM3Vcd5RDg4DdVow=";
+    rev = "refs/tags/${version}";
+    sha256 = "sha256-PeddmHMJYtj/AAItmUVeyETizF7SKzkJ3bXYkeZU+xs=";
   };
 
   postPatch = ''

2022-12-03T23:13:00 An auto update branch exists with message `cwltool: 3.1.20220224085855 -> 3.1.20220406080846`. New version is 3.1.20221201130942.
2022-12-03T23:13:00 The auto update branch does not match or exceed the new version.
2022-12-03T23:13:04 Received ExitFailure 100 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix-build --option sandbox true --arg config "{ allowBroken = true; allowUnfree = true; allowAliases = false; }" --arg overlays "[ ]" -A cwltool
Received ExitFailure 1 when running
Raw command: /nix/store/6fr58pqy02hmgw1h7b9nqmv7vlp3v346-nix-2.3.15/bin/nix log -f . cwltool
Standard output:

warning: unknown setting 'experimental-features'
error: Package ‘python3.10-schema-salad-8.3.20220913105718’ in /var/cache/nixpkgs-update/worker/worktree/cwltool/pkgs/development/python-modules/schema-salad/default.nix:65 is marked as broken, refusing to evaluate.

a) To temporarily allow broken packages, you can use an environment variable
   for a single invocation of the nix tools.

     $ export NIXPKGS_ALLOW_BROKEN=1
     
 Note: For `nix shell`, `nix build`, `nix develop` or any other Nix 2.4+
 (Flake) command, `--impure` must be passed in order to read this
 environment variable.
    
b) For `nixos-rebuild` you can set
  { nixpkgs.config.allowBroken = true; }
in configuration.nix to override this.

c) For `nix-env`, `nix-build`, `nix-shell` or any other Nix command you can add
  { allowBroken = true; }
to ~/.config/nixpkgs/config.nix.

(use '--show-trace' to show detailed location information)