diamond 2.1.8 -> 2.1.9 https://repology.org/project/diamond-aligner/versions
attrpath: diamond
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Old version 2.1.8" not present in master derivation file with contents: { lib, stdenv, fetchFromGitHub, cmake, zlib }:

stdenv.mkDerivation rec {
  pname = "diamond";
  version = "2.1.9";

  src = fetchFromGitHub {
    owner = "bbuchfink";
    repo = "diamond";
    rev = "v${version}";
    sha256 = "sha256-cTg9TEpz3FSgX2tpfU4y55cCgFY5+mQY86FziHAwd+s=";
  };


  nativeBuildInputs = [ cmake ];
  buildInputs = [ zlib ];

  meta = with lib; {
    description = "Accelerated BLAST compatible local sequence aligner";
    longDescription = ''
      DIAMOND is a sequence aligner for protein and translated DNA searches, designed for high performance analysis of big sequence data. The key features are:
      - Pairwise alignment of proteins and translated DNA at 100x-10,000x speed of BLAST.
      - Frameshift alignments for long read analysis.
      - Low resource requirements and suitable for running on standard desktops or laptops.
      - Various output formats, including BLAST pairwise, tabular and XML, as well as taxonomic classification.

      When using the tool in published research, please cite:
      - Buchfink B, Reuter K, Drost HG, "Sensitive protein alignments at tree-of-life scale using DIAMOND", Nature Methods 18, 366–368 (2021). doi:10.1038/s41592-021-01101-x
    '';
    homepage = "https://github.com/bbuchfink/diamond";
    license = lib.licenses.gpl3Plus;
    maintainers = with lib.maintainers; [ thyol ];
  };
}