jmol 16.1.41 -> 16.1.43 https://repology.org/project/jmol/versions attrpath: jmol Checking auto update branch... No auto update branch exists [version] [version] updated version and sha256 [rustCrateVersion] [rustCrateVersion] No cargoSha256 or cargoHash found [golangModuleVersion] [golangModuleVersion] Not a buildGoModule package with vendorSha256 or vendorHash [npmDepsVersion] [npmDepsVersion] No npmDepsHash [updateScript] [updateScript] skipping because derivation has no updateScript [quotedUrls] [quotedUrls] nothing found to replace Diff after rewrites: diff --git a/pkgs/applications/science/chemistry/jmol/default.nix b/pkgs/applications/science/chemistry/jmol/default.nix index f80085278e0a..0b99c9a849d0 100644 --- a/pkgs/applications/science/chemistry/jmol/default.nix +++ b/pkgs/applications/science/chemistry/jmol/default.nix @@ -25,14 +25,14 @@ let }; in stdenv.mkDerivation rec { - version = "16.1.41"; + version = "16.1.43"; pname = "jmol"; src = let baseVersion = "${lib.versions.major version}.${lib.versions.minor version}"; in fetchurl { url = "mirror://sourceforge/jmol/Jmol/Version%20${baseVersion}/Jmol%20${version}/Jmol-${version}-binary.tar.gz"; - hash = "sha256-91vPipS5FTqCl7BUSu47aApIfq2e8dD1SW/LEGQWWio="; + hash = "sha256-lqHlnAeJKbj2Xs9AeAKqdWMWkmD8xWR7f3+nJsBx2YE="; }; patchPhase = '' Successfully finished processing cachix "/nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43" Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 16 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 17 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 17 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 16 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 16 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 15 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 14 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 11 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 11 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 12 Waiting for OfBorg: https://events.ofborg.org/stats.php's evaluator.messages.waiting = 13 [check][nixpkgs-review] [check][nixpkgs-review] took longer than 45m and timed out nixpkgs-review took longer than 45m and timed out Automatic update generated by [nixpkgs-update](https://github.com/ryantm/nixpkgs-update) tools. This update was made based on information from https://repology.org/project/jmol/versions. meta.description for jmol is: A Java 3D viewer for chemical structures meta.homepage for jmol is: https://sourceforge.net/projects/jmol ###### Updates performed - Version update ###### To inspect upstream changes ###### Impact
Checks done (click to expand) --- - built on NixOS - The tests defined in `passthru.tests`, if any, passed - found 16.1.43 with grep in /nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43 - found 16.1.43 in filename of file in /nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43 ---
Rebuild report (if merged into master) (click to expand) ``` 7 total rebuild path(s) 7 package rebuild(s) First fifty rebuilds by attrpath cantor jmol labplot libsForQt5.cantor plasma5Packages.cantor sage sageWithDoc ```
Instructions to test this update (click to expand) --- Either **download from Cachix**: ``` nix-store -r /nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43 \ --option binary-caches 'https://cache.nixos.org/ https://nix-community.cachix.org/' \ --option trusted-public-keys ' nix-community.cachix.org-1:mB9FSh9qf2dCimDSUo8Zy7bkq5CX+/rkCWyvRCYg3Fs= cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY= ' ``` (The Cachix cache is only trusted for this store-path realization.) For the Cachix download to work, your user must be in the `trusted-users` list or you can use `sudo` since root is effectively trusted. Or, **build yourself**: ``` nix-build -A jmol https://github.com/r-ryantm/nixpkgs/archive/ddb42e2e099bee9caf2741b5188369aa4f73ea91.tar.gz ``` Or: ``` nix build github:r-ryantm/nixpkgs/ddb42e2e099bee9caf2741b5188369aa4f73ea91#jmol ``` After you've downloaded or built it, look at the files and if there are any, run the binaries: ``` ls -la /nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43 ls -la /nix/store/v480pr5hr8l6kpyx1yssafb8mlx2byzp-jmol-16.1.43/bin ``` ---

### Pre-merge build results We have automatically built all packages that will get rebuilt due to this change. This gives evidence on whether the upgrade will break dependent packages. Note sometimes packages show up as _failed to build_ independent of the change, simply because they are already broken on the target branch. nixpkgs-review took longer than 45m and timed out --- ###### Maintainer pings cc @Mounium @timokau @omasanori @7c6f434c @collares for [testing](https://github.com/ryantm/nixpkgs-update/blob/master/doc/nixpkgs-maintainer-faq.md#r-ryantm-opened-a-pr-for-my-package-what-do-i-do). https://api.github.com/repos/NixOS/nixpkgs/pulls/263844